Step-by-Step guide to export skeletons from multiple ROIs
Summary
Starting from the beta release 2.1.13-NightBuilds-75 you can export skeletons of different ROIs taken on the image you processed with EpiTools.
How-to
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Execute Polygon mask (ROI) [1]
a. Define the 1st cropping area
a. A new tag will appear in the default pool
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Execute Polygon mask (ROI) [2]
a. Specify the [comparative mode] execution
a. A new pool will appear in the list of available pools
b. Define the 2nd cropping area
a. A new tag will appear in the new pool
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Exporting image skeletons using the 1st polygon mask:
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Select “Generate skeletons” from the analysis menu
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The program will ask to move back to the default poll, click [Ok]
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Select “Use Polygon crop” from the popup window
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Your skeletons will be exported in the analysis folder under the [skeletons] subfolder
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Exporting image skeletons using the 2nd polygon mask:
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Click on [Manage active pools] from the toolbar
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Select the second temporary pool from the list of available pool.
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Select “Generate skeletons” from the analysis menu
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The program will ask in which modality you want to execute the action, select [overwrite module]
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The program will ask to move back to the default poll, answer [No]
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Select “Use Polygon crop” from the popup window
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Your skeletons will be exported in the analysis folder in the [skeleton_current.timestamp] subfolder
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